Bioinformatics (structure) PhD Projects, Programmes & Scholarships

Exploiting Deep Learning-based protein structure prediction for function annotation and structural biology

University of Liverpool Institute of Systems, Molecular and Integrative Biology

Applications will be reviewed until a suitable candidate is appointed. Protein structural information is crucial for an understanding of protein function and evolution. Read more

Supervisors: Prof D J Rigden, Dr R Keegan

Year round applications PhD Research Project Self-Funded PhD Students Only

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New Methods for modelling cofactor-dependent enzyme structure and function

The University of Manchester Department of Chemistry

Enzymes are Nature’s catalysts and many used cofactors and/or coenzymes to catalyse their reactions. While AI and homology methods now often allow the useful prediction of protein structure from amino acid sequence, this can be more challenging when the protein/enzyme contain cofactors. Read more

Supervisor: Prof S Hay

27 October 2024 PhD Research Project Competition Funded PhD Project (Students Worldwide)

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Investigation of RNA secondary structure in plant transposable elements

Durham University Department of Biosciences

Transposable elements (TEs), often referred to as jumping genes, are mobile genetic elements that can be found ubiquitously across the tree of life. Read more

Supervisor: Dr J Cho

17 May 2024 PhD Research Project Funded PhD Project (UK Students Only)

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Machine Learning and Molecular Modelling in Mass Spectrometry

University of Leeds Faculty of Biological Sciences

This PhD project will harness the power of computational modelling and machine learning (A.I.) to analyse data obtained by mass spectrometry experiments and predict structural characteristics of biomolecules and their interactions. Read more

Supervisors: Prof F. Sobott, Dr A Kalli, Dr H Wang

Year round applications PhD Research Project Self-Funded PhD Students Only

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Immune regulation of lung repair, and long-term consequences of infection

University of Edinburgh School of Biological Sciences

This project is one of 14 four year PhD Studentships funded by Medical Research Scotland (MRS) (https://www.medicalresearchscotland.org.uk) to be delivered jointly by the named University and External Partner Organisation (EPO). Read more

Supervisors: Prof G Perona-Wright, Dr S Jenkins

14 May 2024 PhD Research Project Funded PhD Project (UK Students Only)

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Eco-evolutionary dynamics of environmental microbiomes

The University of Manchester Faculty of Biology, Medicine and Health

Include details on the project, outlining the objectives, methods and potential outcomes. Include details of training/techniques to be provided. Read more

Supervisors: Prof M Brockhurst, Dr S Nixon, Dr K Coyte

15 June 2024 PhD Research Project Competition Funded PhD Project (UK Students Only)

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Deep learning-based classification of proteins represented by Structural Alphabets to identify potential drug targets

Kingston University Faculty of Engineering, Computing and the Environment

- This project does not require any previous knowledge in Biology -. Proteins are the building blocks of all living organisms’ cells. Read more

Supervisor: Dr J Abbass

Year round applications PhD Research Project Self-Funded PhD Students Only

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Where has all of the carbon gone? Understanding the molecular mechanisms of long-term soil carbon capture

The University of Manchester Department of Earth and Environmental Sciences

Soils, while unglamorous, form the basis of the terrestrial biosphere and are ultimately the source of the majority of the food that we eat, yet fundamental aspects of how soils form and how they store carbon are poorly understood. Read more

Supervisors: Prof D Cameron, Dr S Nixon

Year round applications PhD Research Project Funded PhD Project (UK Students Only)

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(MRC DTP CASE) Determination of the role of viruses in the microbiome of biofilms formed in the ear of patients with otitis media

The University of Manchester Faculty of Biology, Medicine and Health

Otitis media (OM) is a very common infection of the middle ear characterised by redness, swelling and build-up of fluid behind the eardrum. Read more

Supervisors: Prof P Vallely, Prof P Klapper, Prof S Lovell, Mrs JN Nichani

13 May 2024 PhD Research Project Competition Funded PhD Project (UK Students Only)

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Self funded MSc by research or PhD in Biology: Investigating chromosome segregation in thermophilic Archaea

University of York Department of Biology

Lead supervisor: Prof D Barilla. Co-Supervisor: Prof G Thomas. The student will be registered with the Department of Biology. Read more

Supervisor: Prof D Barilla

30 June 2024 PhD Research Project Self-Funded PhD Students Only

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ThAnoS: thiopeptide antibiotics biosynthesis (GHILAROV_J24DTP)

John Innes Centre Graduate Programme

Background. The acute problem of antimicrobial resistance incentivises us to develop innovative approaches to antibiotic discovery & production. Read more

Supervisor: Dr D Ghilarov

9 May 2024 PhD Research Project Competition Funded PhD Project (UK Students Only)

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Genetics of flowering shoot temperature responses in plants

Durham University Department of Biosciences

The shape of plants is shaped by both genetics and environment; changes in response to temperature can be the most dramatic of all. Read more

Supervisor: Dr J Hepworth

3 May 2024 PhD Research Project Funded PhD Project (UK Students Only)

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Developing synthetic microbial communities for the control of pea downy mildew

University of Worcester Research School

Demand for food production is increasing due to growing global population, reduced land availability for agriculture, concern over the effects of the environment on agriculture, and decreasing yield reliability because of climate change. Read more

Supervisor: Prof M Tor

Year round applications PhD Research Project Self-Funded PhD Students Only

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In Silico targeting of unstructured extracellular histones: En route to a new horizon of drug discovery to target disordered proteins) – second call for applications

Maastricht University Cardiovascular Research Institute Maastricht (CARIM)

Applications can only be submitted via our website. The specific position for Doctoral Candidate 6 (DC6) in the consortium, which is part of Work Package 2 (WP2), aims. Read more

Supervisor: Dr G Nicolaes

30 April 2024 PhD Research Project Competition Funded PhD Project (Students Worldwide)

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Molecular networks rethought

Max Planck Institute for Chemical Ecology International Max Planck Research School

Background. Mass spectrometry (MS) is the analytical platforms of choice for high-throughput screening of small molecules. Molecular networks have found widespread application in untargeted metabolomics, natural products research and related areas. Read more

Supervisors: Prof S Böcker, Prof G. Pohnert

18 April 2024 PhD Research Project Competition Funded PhD Project (Students Worldwide)

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We have 35 Bioinformatics (structure) PhD Projects, Programmes & Scholarships

Bioinformatics (structure) PhD Projects, Programmes & Scholarships

We have 35 Bioinformatics (structure) PhD Projects, Programmes & Scholarships

Exploiting Deep Learning-based protein structure prediction for function annotation and structural biology

New Methods for modelling cofactor-dependent enzyme structure and function

Investigation of RNA secondary structure in plant transposable elements

Machine Learning and Molecular Modelling in Mass Spectrometry

Immune regulation of lung repair, and long-term consequences of infection

Eco-evolutionary dynamics of environmental microbiomes

Deep learning-based classification of proteins represented by Structural Alphabets to identify potential drug targets

Where has all of the carbon gone? Understanding the molecular mechanisms of long-term soil carbon capture

(MRC DTP CASE) Determination of the role of viruses in the microbiome of biofilms formed in the ear of patients with otitis media

Self funded MSc by research or PhD in Biology: Investigating chromosome segregation in thermophilic Archaea

ThAnoS: thiopeptide antibiotics biosynthesis (GHILAROV_J24DTP)

Genetics of flowering shoot temperature responses in plants

Developing synthetic microbial communities for the control of pea downy mildew

In Silico targeting of unstructured extracellular histones: En route to a new horizon of drug discovery to target disordered proteins) – second call for applications

Molecular networks rethought

We have 35 Bioinformatics (structure) PhD Projects, Programmes & Scholarships

Bioinformatics (structure) PhD Projects, Programmes & Scholarships

We have 35 Bioinformatics (structure) PhD Projects, Programmes & Scholarships

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