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Bioinformatics (complex systems) PhD Projects, Programs & Scholarships

We have 35 Bioinformatics (complex systems) PhD Projects, Programs & Scholarships

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  20 Funded PhD Positions in the IMPRS-CellDevoSys - Integrating Biology, Physics, Chemistry & Computer Science

Funding Type

PhD Type

A 4-year PhD Program involving 3 renowned international institutes. the Max Planck Institute of Molecular Cell Biology and Genetics, the Center for Systems Biology Dresden, and the Max Planck Institute for the Physics of Complex Systems.
  20 Funded PhD Positions in the IMPRS-CellDevoSys - Integrating Biology, Physics, Chemistry & Computer Science

Funding Type

PhD Type

A 4-year PhD Program involving 3 renowned international institutes. the Max Planck Institute of Molecular Cell Biology and Genetics, the Center for Systems Biology Dresden, and the Max Planck Institute for the Physics of Complex Systems.
  Systems level analysis of platelet signalling
  Dr M J Fry, Prof J M Gibbins
Applications accepted all year round

Funding Type

PhD Type

We are interested in how intracellular signal transduction networks bring about complex biological behaviours in cells. We do this by combining computational biology with wet laboratory experimentation.
  Gene Regulatory Networks in Development and Disease
  Dr T Sauka-Spengler
Application Deadline: 24 July 2020

Funding Type

PhD Type

Our laboratory focuses on deciphering gene regulatory networks that govern complex programmes during early vertebrate development.
  Gene Regulatory Networks in Development and Disease
  Dr T Sauka-Spengler
Application Deadline: 24 July 2020

Funding Type

PhD Type

Our laboratory focuses on deciphering gene regulatory networks that govern complex programmes during early vertebrate development.
  KESS2 Scholarship: Realistic CNI Cyber Security Exercising (MRes)
  Dr I Wilson
Application Deadline: 2 February 2020

Funding Type

PhD Type

Here is an exciting opportunity to study a system and its associated technology which could lead to entirely new approaches in Command and Control Systems.
  (BBSRC DTP) Using mathematical models to understand the role of the respiratory microbiome in asthma
  Research Group: Molecular Environmental Sciences
  Dr T Gilman, Dr M Muldoon, Prof N Papadopoulos, Prof D Robertson
Application Deadline: 31 January 2020

Funding Type

PhD Type

Most of the cells in the human body are not human. There are rich microbial communities (i.e., microbiota) in our digestive tracts, our respiratory tracts, and on our skin.
  Analysis of Heparin Binding Proteins and the Supramolecular Structure of Extracellular Matrix
  Prof D G Fernig, Prof C E Eyers
Applications accepted all year round

Funding Type

PhD Type

Changes in heparan sulfate structure and location have long been associated with Alzheimer’s disease, but the functional significance of this has remained elusive.
  KESS2 Scholarships: Deception Approaches for CNI (MbyRes)
  Dr E Llewellyn
Application Deadline: 2 February 2020

Funding Type

PhD Type

This is a funded MbyRes, including a generous stipend and tuition fees, with well-resourced circumstances for a successful scholarship.
  PhD Cancer Genetics - Examining how telomere dysfunction drives the evolution of the cancer genome
  Prof D Baird
Application Deadline: 1 March 2020

Funding Type

PhD Type

Telomeres are structures that cap the ends of eukaryotic chromosomes, preventing the recognition and repair of the natural chromosomal terminus by the DNA damage response (DDR) apparatus.
  PhD Student Positions at International Max Planck Research School for Molecular Life Sciences, Munich

Funding Type

PhD Type

The International Max Planck Research School for Molecular Life Sciences. From Biological Structures to Neural Circuits (IMPRS-LS) currently has an open call for fully funded PhD student positions.
  PhD Student Positions at International Max Planck Research School for Molecular Life Sciences, Munich

Funding Type

PhD Type

The International Max Planck Research School for Molecular Life Sciences. From Biological Structures to Neural Circuits (IMPRS-LS) currently has an open call for fully funded PhD student positions.
  (A*STAR) A multiscale approach to modelling the structure and dynamics of large enzymes
  Dr S Hay, Prof N Scrutton, Dr L Johannissen
Application Deadline: 31 January 2020

Funding Type

PhD Type

Much of biochemistry relies on atomic resolution structural information, most commonly determined using X-ray crystallography. However, due to their dynamic nature, it is often not possible to determine the structure of large multi-domain proteins.
  Partitioning primary and secondary changes of gene expression caused by gene mutations
  Dr D Talavera, Prof G D Pavitt, Dr J-M Schwartz
Applications accepted all year round

Funding Type

PhD Type

Control of gene expression is a complex cell process, which involves balancing both the synthesis and the degradation of RNA and protein so as to establish optimal levels of each protein.
  Pattern Formation (Applied Nonlinear Dynamics)
  Prof A M Rucklidge
Applications accepted all year round

Funding Type

PhD Type

Regular patterns, such as stripes, squares and hexagons, are ubiquitous in nature, and their formation and stability are governed by the intricate and complex interactions of symmetry and nonlinearity.
  Quantitative Risk Assessment for Food Safety (allergens, microbial pathogens or chemical contaminants)
  Prof N Strachan, Dr F Perez-Reche
Applications accepted all year round

Funding Type

PhD Type

This project will use computational methods to assess risks. An expectation of the society we live in is that the food that we eat is safe.
  Mathematical Modelling of the Bovine Reproductive Cycle
  Dr L Creedon, Dr M McAfee
Applications accepted all year round

Funding Type

PhD Type

This project will create mathematical models of aspects of the reproductive cycle of cows. The techniques used will include systems of ordinary differential equations, linear algebra, and networks/graphs.
  Self-organized collective patterns on graphs (ESR 3)
  Prof M Hutt
Application Deadline: 31 January 2020

Funding Type

PhD Type

Over the last few years, diverse studies have established that many forms of dynamics self-organize on networks to give rise to large-scale collective patterns.
  Biosensors for Forensic Analysis - 4 Year PHD Studentship
  Research Group: School of Population Health & Environmental Sciences
  Dr N Frascione, Dr J Gooch
Application Deadline: 14 February 2020

Funding Type

PhD Type

The Forensic Biochemistry group within the School of Population Health & Environmental Sciences is seeking an exceptional and highly motivated early career researcher with a strong background in analytical science, forensic science or biochemistry to undertake a fully funded PhD studentship in the development of biosensors for the detection and identification of body fluids.
  Eco-evolutionary dynamics of the gut microbiota
  Dr R Bacigalupe, Prof JR Raes
Application Deadline: 31 March 2020

Funding Type

PhD Type

The intestinal microbiota is composed of multiple species of microorganisms that have important functions for the health of the human host.
  The Oxford Interdisciplinary Bioscience Doctoral Training Partnership

Funding Type

PhD Type

The Oxford Interdisciplinary Bioscience Doctoral Training Partnership (DTP) programme is a 4-year DPhil*/PhD programme that aims to equip a new generation of researchers with the skills and knowledge needed to tackle the most important challenges in bioscience research.
  The Oxford Interdisciplinary Bioscience Doctoral Training Partnership

Funding Type

PhD Type

The Oxford Interdisciplinary Bioscience Doctoral Training Partnership (DTP) programme is a 4-year DPhil*/PhD programme that aims to equip a new generation of researchers with the skills and knowledge needed to tackle the most important challenges in bioscience research.
  The Oxford Interdisciplinary Bioscience Doctoral Training Partnership

Funding Type

PhD Type

The Oxford Interdisciplinary Bioscience Doctoral Training Partnership (DTP) programme is a 4-year DPhil*/PhD programme that aims to equip a new generation of researchers with the skills and knowledge needed to tackle the most important challenges in bioscience research.
  (BBSRC DTP) Integrative statistical inference methods for eukaryotic gene regulation with applications to embryonic stem cell differentiation
  Dr I Iqbal, Prof M Rattray, Prof A Sharrocks
Application Deadline: 31 January 2020

Funding Type

PhD Type

Embryonic stem cells (ESCs) can differentiate into different cell types through intermediary cell states and deeper understanding of the regulatory control underlying these differentiation stages is a very important topic in the study of mammalian development (Yang et al., 2014 & 2019).
  Integrative statistical inference methods for eukaryotic gene regulation with applications to embryonic stem cell differentiation
  Dr I Iqbal, Prof M Rattray, Prof A Sharrocks
Applications accepted all year round

Funding Type

PhD Type

Embryonic stem cells (ESCs) can differentiate into different cell types through intermediary cell states and deeper understanding of the regulatory control underlying these differentiation stages is a very important topic in the study of mammalian development (Yang et al., 2014 & 2019).
  Molecular Pathology of Glaucoma
  Prof C Willoughby
Applications accepted all year round

Funding Type

PhD Type

Primary open-angle glaucoma (POAG) is a leading cause of blindness worldwide affecting over 64 million people. Glaucoma is a complex multifactorial ocular disease with significant health and socio-economic impact.
  Evolutionary game theory and population dynamics
  Dr H Duong
Applications accepted all year round

Funding Type

PhD Type

Evolutionary Game Theory (EGT) [MSP73] has proven to be a powerful and versatile mathematical framework for the modelling and analysis of complex biological (and economical) systems whenever there is frequency dependent selection.
  Reliability analysis, fault diagnosis and optimization in dynamic small data environment using explainable AI
  Research Group: Applied Computing
  Dr Q Zhang
Applications accepted all year round

Funding Type

PhD Type

The smart system consists of the man-made machine and the intelligent decision making. Mostly, the machine will be designed with automation purpose and the decision making can be achieved based on big data training and AI technology.
  PhD inChemistry - Protein structural mimics through chemical ligation
  Dr D Thomson
Application Deadline: 1 July 2020

Funding Type

PhD Type

This project targets the interface between chemistry and biology. Chemistry has provided many reactions that can be used to join complex molecules together, these ‘ligation’ reactions are useful, but often leave behind chemical functionality that serves no purpose other than to connect fragments together.
  Using next-generation sequencing and CRISPR-Cas9 gene editing to investigate penetrance and phenotypic variation in inherited eye disease
  Dr C Toomes
Applications accepted all year round

Funding Type

PhD Type

Human inherited retinal diseases (IRDs) result from mutations in over 250 different genes, many of them implicated by the Leeds Vision Research Group (eg Panagiotou et al 2017, AJHG 100:960-968; El-Asrag et al 2015, 96:948-54).
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