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  A systems biology analysis of thioredoxin reductase inhibition to support discovery of a novel antifungal treatment


   Institute of Systems, Molecular and Integrative Biology

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  Dr Tao You  Applications accepted all year round  Self-Funded PhD Students Only

About the Project

Fungal diseases affect approximately 1.2 billion individuals worldwide with at least 1.5 million deaths each year. The emergence of resistant strains made clinical treatment failures more frequent. There is an urgent to treat drug resistant Candida spp. and Candida auris. In the UK, invasive and serious fungal disease impacts between 240k – 660k patients annually, causing more deaths than some superbugs.

Comparative genomics revealed fungal thioredoxin reductase 1 (Trr1) as an exciting new drug target as it is an essential gene only present in fungi but not in humans. This offers an exciting opportunity to develop a novel small-molecule intervention with broad spectrum single agent activity against clinically resistant fungi.

Target validation data thus far have been generated using trr1 null mutants. However, pharmacological intervention would never reach 100% target inhibition. Therefore, it is crucial to investigate how fungal pathogens respond to different levels of TRR1 inhibition to choose the minimum requirement of compounds and to pre-empt potential tolerance / resistance mechanisms.

In this exciting translational project, you will quantify Trr1 inhibition and fungal load responses to elucidate the pharmacodynamics of Trr1 inhibition in vitro and in vivo. You will then develop a Pharmacokinetics/Pharmacodynamics model to encompass the in vitro data on molecular and cellular levels, and then use this model to generate insights into how in vivo animal and human responses might be different from in vitro observations. You will also learn to apply disease modelling to analyse how patient survival is related to the fungal load and predict clinical treatment outcomes of a novel Trr1 therapy.

This project will equip you with the impressive skills in pharmacometrics and antimicrobial resistance, which will pave the way for a successful career in drug discovery and development.


Biological Sciences (4) Mathematics (25) Medicine (26)

Funding Notes

The project is open to both European/UK and International students. It is UNFUNDED and applicants are encouraged to contact the Principal Supervisor directly.
Assistance will be given to those who are applying to international funding schemes. The successful applicant will be expected to provide the funding for tuition fees (~£4.6k per year for UK students) and living expenses (~£12k per year). Research costs is minimum. Details of costs can be found on the University website:
https://www.liverpool.ac.uk/study/postgraduate-research/fees-and-funding/fees-and-costs/
New self-funded applicants may be eligible for a tuition fees bursary (UK applicants only) or a £2000 ISMIB Travel and Training Support Grant.

References

Hope W et al. (2016) Pharmacodynamics for antifungal drug development: an approach for acceleration, risk minimization and demonstration of causality. J Antimicrob Chemother. 71: 3008–3019.
A da Silva Dantas et al. (2010) Thioredoxin regulates multiple hydrogen peroxide-induced signaling pathways in Candida albicans. Mol Cell Biol. 30(19): 4550-4563.

Where will I study?

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