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  Defining new ways bacteria control environmental cycling of sulphur and carbon (SULLIVAN_UBIO23ARIES)


   School of Biological Sciences

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  Dr Matthew Sullivan, Prof Jon Todd, Prof Charles Brearley  No more applications being accepted  Funded PhD Project (UK Students Only)

About the Project

Scientific background 

The microbial world is a fascinating network of organisms that live in our environment and play significant roles in regulating our climate. The molecule dimethylsulphoniopropionate (DMSP) is an anti-stress compound made by plants, algae and bacteria, in the order of hundreds of millions of tonnes annually, worldwide. DMSP protects organisms from harsh conditions found in diverse ecological niches.  

There is huge diversity in bacteria that make and degrade DMSP, however precisely when and why they do this is not well understood [1,2]. When DMSP is degraded, a climate-cooling gas called dimethylsulphide (DMS) is released that enters the atmosphere and forms cloud condensation nuclei, influencing atmospheric reflectivity and has vast potential to modulate the global climate [1]. A greater understanding of DMSP biology is of paramount importance for designing future strategies that exploit this molecule for its potential to reverse the effects of global warming.  

This project will be hosted in the School of Biological Sciences at UEA, one of the world’s foremost centres of excellence for DMSP research. The individual will identify new genetic systems involved in DMSP metabolism and will make fundamental discoveries in the discipline of environmental microbiology.  

Research methodology 

The project harnesses leading-edge genetic techniques to investigate bacterial DMSP biology. The individual will use transposon-directed insertion sequencing [3] to identify entirely new genes and enzymes that act on DMSP. Analytical techniques will be coupled to powerful biomolecular assays. The individual will be co-located in Sullivan and Todd’s labs in the School of Biological Sciences, with opportunities for collaboration further afield. 

Training 

The individual will be will learn techniques in environmental and molecular microbiology, including genetic manipulation, next-generation sequencing, bioinformatics, and biophysical analyses. There will be opportunities to present at internationally-leading conferences and access a network of global researchers. UEA’s post-graduate professional development team will provide support in enhancing translational skills. 

Person specification 

We seek an enthusiastic and highly motivated individual with willingness to learn new concepts in molecular biology and/or microbiology to join our vibrant and collegiate community, including a degree in the biological or environmental sciences disciplines. 

Informal enquires to Dr Matthew Sullivan ([Email Address Removed]) are welcome

For more information about the project, please visit the UEA website www.uea.ac.uk

The start date is October 2023.


Biological Sciences (4)

Funding Notes

This project has been shortlisted for funding by the ARIES NERC DTP. Successful candidates will be awarded a NERC studentship, which covers fees, stipend (£17,668 for 2022/23) and funding to support the doctoral research. Excellent applicants from quantitative disciplines may be considered for an additional three months’ studentship funding.

Unfortunately, no additional funding is available to assist with relocation or visa costs.

ARIES encourages applications from all, regardless of gender, ethnicity, disability, age, or sexual orientation. Academic qualifications are considered alongside relevant non-academic experience.

For further information, please visit www.aries-dtp.ac.uk

References

1 Curson A, Todd JD, Sullivan MJ and Johnston A. (2011) Catabolism of dimethylsulphoniopropionate: microorganisms, enzymes and genes. Nature Reviews Microbiology 9(12) 849-59
2 Williams B, Todd JD (2019) A day in the life of marine sulfonates. Nature Microbiology 4(10)1610-1611.
3 Cain A, Barquist L, Goodman A, Paulsen I, Parkhill J, van Opijnen T (2020) A decade of advances in transposon-insertion sequencing. Nature Reviews Genetics 21 526-540

Where will I study?