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Fluorescence-based sensing of active metabolites linked to the pathogenesis of neurodegenerative disorders


Project Description

Kynurenine is an intermediate in the pathway that converts the amino acid, tryptophan, to the redox enzyme, nicotinamide adenine dinucleotide (NAD+/NADH) - an essential molecule of life. The sequence of reactions is known as the kynurenine pathway, and their perturbation during inflammatory processes, leads to accumulation of neuroactive metabolites in the human central nervous system – a phenomenon implicated in Alzheimer’s, Parkinson’s and Huntington’s disease.

Recent research in Leicester has identified key regulatory enzymes in the pathway that could be potential drug targets for these disorders. Nonetheless, a precise understanding on how activation of the pathway is regulated in vivo is lacking, as well as the spatial and temporal changes in metabolism that occur during disease. This problem will be the focus of the project and will need to be addressed by a multidisciplinary approach encompassing biophotonics, chemical biology and genetics. While the successful applicant will be someone with demonstrable skills in biophotonics and chemical physics and based in the Department of Chemistry, they will need to work outside the confines of traditional departmental structures and collaborate with researchers in the Leicester Institute for Structural and Chemical Biology and the Department of Genetics and Genome Biology.

Yeast cells can be used to explore how particular genes can modify “symptoms” of neurodegenerative disease. The simplicity of the model system affords a great opportunity to develop new methodology to sense the real time production of kynurenine and its turnover into NAD+/NADH, which is upregulated in Huntington’s disease. We intend to design a fluorescence-based chemical sensor to detect kynurenine, and other metabolites, in the pathway. The changes in absolute levels of kynurenine, imaged in live cells and monitored in real time, will give a measure of activation of this pathway. Laser-based microscopy techniques will be employed in combination with the sensor, and various photophysical processes such as fluorescence resonance energy transfer and fluorescence lifetime will be exploited. We will begin by utilising yeast, but, in the longer term, the chemical sensor will be employed in both mammalian cells and fruit flies.

By making progress on understanding spatiotemporal accumulation of kynurenine within cells and the central nervous system of flies and the underlying regulatory processes, we will be making a transformative contribution to the study of neurodegenerative diseases.

Entry requirements

Applicants are required to hold/or expect to obtain a UK Bachelor Degree 2:1 or better in a relevant subject. The University of Leicester English language requirements apply where applicable.

How to apply

The online application and supporting documents are due by Monday 21st January 2019.

Any applications submitted after the deadline will not be accepted for the studentship scheme.

References should arrive no later than Monday 28th January 2019.

Applicants are advised to apply well in advance of the deadline, so that we can let you know if anything is missing from your application.

Required Materials
1. Online application form
2. Two academic references
3. Transcripts
4. Degree certificate/s (if awarded)
5. Curriculum Vitae
6. EPSRC Studentship Form
7. English language qualification

Applications which are not complete by the deadline will not be considered for the studentship scheme. It is the responsibility of the applicant to ensure the application form and documents are received by the relevant deadlines.

All applications must be submitted online, along with the supporting documents as per the instructions on the website. Please ensure that all email addresses, for yourself and your referees, are correct on the application form.

Project / Funding Enquiries

Application enquiries to
Closing date for applications – 21st January 2019

Funding Notes

This research project is one of a number of projects in the College of Science and Engineering. It is in competition for funding with one or more of these projects. Usually the project that receives the best applicant will be awarded the funding.

Home/EU Applicants:
This project is eligible for a fully funded EPSRC studentship which includes:
• A full UK/EU fee waiver for 3.5 years
• An annual tax free stipend of £14,777 (2018/19)
• Research Training Support Grant (RTSG)

Studentships are available to UK/EU applicants who meet the EPSRC Residency Criteria; if you have been ordinarily resident in the UK for three years you will normally be entitled to apply for a full studentship.

If you are an EU student and do not meet the residency criteria, please contact for more information on the funding options available.

International Applicants:
Unfortunately, there is no funding for international students on this project.

References

1. Bioimaging and spectroscopy
a. Nucleic Acids Res 46, 2145-2158 (2018)
b. Chemical Reviews 118, 5330-5358 (2018)
c. Nucleic Acids Res 45, 2051 (2017)
d. ChemistrySelect 2, 3342–3346 (2017)

2. Neurodegeneration and the kynurenine pathway
a. Nature Genetics 37, 526-531 (2005)
b. Current Biology 21, 961-966 (2011)
c. Proc Natl Acad Sci U S A. 113, 5435-5440 (2016)

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