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  Molecular footprints of mechanosensation


   Faculty of Biological Sciences

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  Prof F. Sobott, Dr C Pliotas, Dr A Kalli  No more applications being accepted  Competition Funded PhD Project (Students Worldwide)

About the Project

Bacterial membranes can sense mechanical pressure, which is important as it could indicate that they are about to burst due to high internal, hydrostatic pressure. This is however avoided thanks to channel proteins such as MscL (Mechano-sensitive channel of Large conductance) which can act as pressure relieve valves. Similar proteins are also important for temperature sensations in humans, yet our understanding of the mechanism of mechanosensation is lacking. How are mechanical forces, via lipid tethering, pulling on the protein structure to open the channel? Can we lock this mechanism, using mutations or specific lipids, at various stages? Can we follow it in “real time” using fast (ms-μs) labelling techniques?

We have access to over 50 MscL mutants and will study their behavior using innovative, fast labelling techniques such as hydrogen/deuterium exchange and hydroxyl radical labeling with a readout based on mass spectrometry (MS). Together with data from electron paramagnetic resonance (EPR), we can create detailed simulations of these interesting and important proteins and their function. You will work with experts in their respective fields (Membrane protein structural biology, MS, EPR and simulations) and have a unique opportunity to gain expertise in cutting-edge integrative structural biology technology.

Funding Notes

White Rose BBSRC Doctoral Training Partnership in Mechanistic Biology
4 year fully-funded integrated research and skills training programme, starting October 2021:
• Research Council Stipend (estimated £15,600 per year)
• Tuition fees at the UK fee rate (£4,473 per year)
• Research training and support grant

Please note: international tuition fees for 2021 entry are £23,750

Not all projects will be funded; the DTP will appoint a limited number of candidates via a competitive process.

Requirements:
At least a 2:1 honours degree or equivalent. We welcome students with biological, chemical or physical sciences, or
mathematical backgrounds interested in biological questions.

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