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  Viral regulation of host cell DNA damage response pathways


   Institute of Cancer and Genomic Sciences

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  Dr A S Turnell, Dr C McCabe  Applications accepted all year round  Self-Funded PhD Students Only

About the Project

Human adenoviruses are small non-enveloped viruses and possess a linear, double-stranded DNA genome. Adenovirus has long been used as a tool to dissect the molecular basis of key biological processes such as growth, differentiation and death. Indeed, studies investigating the roles of the adenovirus early region proteins has led to key advances in the understanding of these basic cellular processes and provided insight into how adenovirus usurps control of molecular signalling pathways in order to promote viral replication and cellular transformation.

The phosphoinositide 3-kinase like kinase protein products of the Ataxia Telangiectasia (A-T) Mutated gene, ATM, and ATM-Rad3-related gene, ATR, function as key transducers of signals initiated in response to DNA damage and serve to activate cell cycle checkpoints to allow for DNA repair, or apoptosis. It is apparent that, in order to replicate their genomes efficiently in host cells, viruses employ numerous strategies to selectively activate and/or evade host cell DNA damage response pathways. As such, adenovirus has evolved largely to bypass, or inactivate, host cell DNA damage response pathways that would otherwise initiate cell cycle arrest or apoptosis in the infected cell. Indeed, many DNA damage response proteins are inactivated during infection by either proteasomal-mediated degradation and/or recruitment to viral replication centres or PML-containing nuclear tracks.

The aim of this studentship is to further our understanding of cellular DNA damage response pathways at the molecular level and determine how adenoviruses targets these pathways in order to promote viral replication. 

Biological Sciences (4)

Funding Notes

Applications are invited from self-funded UK/EU students and International students who have at least an upper second class degree in a relevant discipline and, where relevant, have demonstrated an appropriate level of English proficiency.

References

Nazeer R, Qashqari FSI, Albalawi AS, Piberger AL, Tilotta MT, Read ML, Hu S, Davis S, McCabe CJ, Petermann E, Turnell AS (2019). Adenovirus E1B-55K targets SMARCAL1 for degradation during infection and modulates cellular DNA replication. J Virol. JVI.00402-19. doi: 10.1128/JVI.00402-19.
Forrester NA, Patel RN, Speiseder T, Groitl P, Sedgwick GG, Shimwell NJ, Seed R I, Ó Catnaigh P, McCabe CJ, Stewart GS, Dobner T, Grand RJ, Martin A, Turnell A S. (2012). Adenovirus E4orf3 targets Transcriptional Intermediary Factor 1gamma for proteasome-dependent degradation during infection. J. Virol. 86:3167-3179.
Turnell AS, Grand RJ (2012). Viral regulation of DNA damage response pathways. J. Gen. Virol. 93:2076-2097.
Blackford AN, Patel RN, Forrester NA., Theil K, Groitl P, Stewart GS, Taylor AMR, Morgan IM, Dobner T, Grand RJ, Turnell AS (2010). Adenovirus 12 E4orf6 inhibits ATR activation by promoting TOPBP1 degradation Proc. Natl. Acad. Sci. USA. 107:12251-12256.
Blackford AN, Bruton RK, Dirlik O, Stewart GS, Taylor AMR, Dobner T, Grand RJ, Turnell AS (2008) A role for E1B-AP5 in ATR kinase signalling pathways during adenovirus infection. J. Virol. 82:7640-7652.

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