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  Why don't all blood vessels behave the same way? A proteomic, transcriptomic and functional analysis of vascular tissue.


   Institute of Life Course and Medical Sciences

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  Dr Richard Rainbow, Dr P Sharma, Dr A Chadwick  No more applications being accepted  Self-Funded PhD Students Only

About the Project

The contraction and dilation of blood vessel controls the flow of blood, and the oxygen/nutrients contained within, to the tissues to match the metabolic demand. When exercising, blood vessels supplying skeletal muscle respond to the sympathetic drive and adrenaline release by dilating, therefore providing more blood flow to the muscle with increased metabolic demand. Conversely, arteries supplying blood to the gut undergo vasoconstriction to the same stimuli to reduce blood flow in an area that is not as vital during exercise. This differential response of the vasculature to the same stimuli suggests that blood vessels are not the same and may express different combinations of receptors, ion channels and signalling molecules.

These differences are potentially very important for us in terms of understanding how blood flow is controlled to match tissue demand, and eventually will lead to investigations of how this might break down in disease states. To begin with, this project will focus on healthy tissue, however this could be expanded to look in disease models, such as the spontaneously hypertensive or diabetic rat models.

To investigate the differences between vascular beds, our group has undertaken a transcriptomic profile of three vascular beds, the aorta, mesenteric and pulmonary arteries. From this data library, we have identified stark differences in the mRNA for different receptors, channels and signalling molecules between different vascular beds. Remarkably, we have also shown that within the vascular tree for mesenteric arteries there are differences between 1st, 2nd, 3rd and 4th order vessels. These findings suggest that not only are the vascular beds different from each other, but within the vascular bed there are marked differences in the expression of vasoconstriction and dilation-linked receptors that can be measured as differences in contractile behaviour.

In this project, the student will carry out further investigations of the transcriptomic data, adding further vascular beds to our data set with a view to this becoming an online repository for information to be shared with the wider community. The student will also carry out mass spec-based proteomic analysis of the vascular beds to demonstrate that protein levels of our identified targets are changed. These data will be confirmed using qPCR and western blotting where feasible. Using wire myography, patch clamp recording, Seahorse analyser and cellular fluorescence imaging, the functional differences of differences in receptor expression and metabolic profile will be investigated to provide functional evidence for the effects of the expression changes within the tissue.

Student experience

This PhD aims to use world-leading equipment and facilities to give a unique opportunity for a student to generate fundamental understanding of vascular biology which could be essential knowledge in understanding a multitude of diseases which have global impact such as hypertension and diabetes

The successful student will gain training in a multitude of techniques, ranging from cell culture, electrophysiology measurements, wire myography, metabolic analysis using Seahorse analyser technology, and essential research skills including western blotting, qPCR, immunofluorescence, and ELISA.

Applicant Information

The successful applicant should have an interest in Cardiovascular Research and hold a minimum undergraduate qualification 2:1 or equivalent in a science or health-related subject.

All postgraduate students undertake the Post Graduate Researcher (PGR) Development Programme which aims to enhance their skills for a successful research experience and career. They are required to maintain an online record of their progress and record their personal and professional development throughout their research degree. The Liverpool Centre for Cardiovascular Science holds monthly research group meetings where students are given opportunities to present their research and meet and interact with their peers and senior researchers. Students are also encouraged to attend the seminar series to gain a breadth of knowledge from related research within the Department of Cardiovascular and Metabolic Medicine and wider research themes across our Institute.

The Institute of Life Course and Medical Science is fully committed to promoting gender equality in all activities. In recruitment we emphasize the supportive nature of the working environment and the flexible family support that the University provides. The Institute holds a silver Athena SWAN award in recognition of on-going commitment to ensuring that the Athena SWAN principles are embedded in its activities and strategic initiatives.

Research project related enquiries should be made in the first instance to Dr Richard Rainbow ([Email Address Removed]). All general enquiries should be directed to Mrs Eleanor Toole ([Email Address Removed]).

To apply please send your CV and a covering letter to Dr Richard Rainbow ([Email Address Removed]).


Biological Sciences (4) Medicine (26)

Funding Notes

This is a self-funded PhD opportunity open to students worldwide. Candidates with scholarships awarded by external funding bodies/national governments are invited to apply. Information on research degree fees and how to fund your PhD are available on the University website at https://www.liverpool.ac.uk/study/postgraduate-research/fees-and-funding/

References

JACKSON, R, BRENNAN, S, FIELDING, P, SIMS, MW, CHALLISS, RA, ADLAM, D, SQUIRE, IB & RAINBOW, RD 2016. Distinct and complementary roles for alpha and beta isoenzymes of PKC in mediating vasoconstrictor responses to acutely elevated glucose. Br J Pharmacol, 173, 870-87.
RAINBOW RD, BRENNAN S, JACKSON R, BEECH AJ, BENGREED A, WALDSCHMIDT HV, TESMER JJG, CHALLISS RAJ AND WILLETS JM: 2018. Small-Molecule G Protein-Coupled Receptor Kinase Inhibitors Attenuate G Protein-Coupled Receptor Kinase 2-Mediated Desensitization of Vasoconstrictor-Induced Arterial Contractions. Mol Pharmacol, 94(3), 1079-1091,

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