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  Characterising the Dissemination of Antimicrobial Resistance in Bioaerosols


   UK CEH

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  Dr A Singer, Prof J P Reid  No more applications being accepted  Competition Funded PhD Project (European/UK Students Only)

About the Project

The emergence of drug-resistant infections was inevitable given the careless use of antibiotics since its mass production in the 1940’s. Among the most problematic aspects of drug resistance is their ability to be horizontally transferred from one microbe to another. It has been assumed that the transmission of antibiotic resistance genes (ARGs) to and from environmental microorganisms occurs in wastewater and manure-amended soils. However, there is no research on ARG transmission and dissemination in the aerosol phase despite it being potentially a ubiquitous pathway and thus of great importance to human and veterinary health.

The Bristol supervisor has developed a ground-breaking instrument that allows for the creation and manipulation of bioaerosols in controlled laboratory conditions, thereby allowing for the assessment of microbial processes, such as ARG transmission, in aerosols. The student will work with a collaborating SME, Biral Industrial & Research Associates, to further improve the instrument for more broad applications relating to bioaerosol research and risk characterisation.

The specific aims of this project will be to: (1) Determine the environmental parameters needed to sustain the viability of microorganisms in the aerosol phase, allowing for the transfer and dissemination of mobile genes, such as antibiotic resistance; (2) Assess the risk of AMR transfer and dissemination from a range of natural and engineered environments.

Specific chemical, physical and biological factors will be systematically explored for their impact on ARG transfer and dissemination using empirical measures of bacterial survival and gene transfer within the bioaerosol. An exposure hazard model will be developed based on the outcome of the chemical-, physical- and biological-derived factors to generate an evidence base for more targeted risk assessments that can be conducted empirically in selected locations (e.g., beach, wastewater). The experimental component of the PhD will coincide with further refinement of the instrumentation in collaboration with the CASE partner.

The postgraduate student will receive training in aerosol science within the Bristol Aerosol Research Centre (BARC), School of Chemistry. Training in molecular microbiology will be provided by NERC Centre for Ecology & Hydrology (CEH) in Wallingford, approximately 1 hour from Bristol by train. Comprehensive training on personal and professional development will be included as a component of the studentship. The student would be encouraged to participate in workshops, conferences, elective training courses from CEH’s learning and development (e.g., academic writing, networking, data management, modelling/statistics, endnote), formally assessed courses and informal opportunities.

Applicants for a studentship must have obtained, or be about to obtain, a 2.1 degree or higher. If you have a 2.2 degree, but have also obtained a masters qualification, you are also eligible. Substantial relevant post-graduate experience may also be sufficient; please contact the supervisors for more information.

To apply please send your CV and a covering letter stating your motivation to work on this project to the main project supervisor Dr A. Singer ([Email Address Removed]) by midnight 07/01/2018

Funding Notes

This project is one of a number of proposed topics that are in competition for funding from the NERC GW4+ Doctoral Training Partnership http://nercgw4plus.ac.uk/. Commencing in autumn 2018 if successful.

Full studentships (fees and stipend) are only available to UK nationals and other EU nationals that have resided in the UK for three years prior to commencing the studentship. If you are a citizen of an EU member state you will eligible for a fees-only award, and must be able to show at interview that you can support yourself for the duration of the studentship at the RCUK level.

References

A.E. Haddrell, J.F. Davies and J.P. Reid, 'Dynamics of Particle Size on Inhalation of Environmental Aerosol and Impact on Deposition Fraction', Environ. Sci. & Tech. 49 (2015) 14512–14521.

U.K. Krieger, C. Marcolli and J.P. Reid, ‘Exploring the Complexity of Aerosol Particle Properties and Processes using Single Particle Techniques’, Chemical Society Reviews 41 (19) (2012) 6631 - 6662.

Singer AC. 2017 How chemicals and heavy metals contribute to antimicrobial resistance. Pharmaceutical Journal 298(7898) doi: 10.1211/PJ.2017.20202286

Singer AC, Shaw H, Rhodes V, Hart A. 2016 Review of Antimicrobial Resistance in the Environment and Its Relevance to Environmental Regulators. Front Microbiol. Nov 1;7. doi: 10.3389/fmicb.2016.01728