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  Analysis of lipid and lipid-anchored protein organization at the T-cell surface using novel super-resolution (STED-FCS) microscopy


   Radcliffe Department of Medicine

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  Prof C Eggeling, Prof S Davis  No more applications being accepted  Competition Funded PhD Project (Students Worldwide)

About the Project

One of the key proteins at the heart of the remaining questions on the molecular organization and dynamics of the resting T-cell surface is the Src-type tyrosine kinase, Lck, which initiates signalling in T-cells by phosphorylating the T-cell receptor (TCR). Lck is of considerable intrinsic interest firstly because its activity needs to be constrained in order to prevent uncontrolled T-cell activation, and secondly because it is an unusual surface component insofar as it associates with the membrane via two types of lipid-type anchors i.e. myristoyl and palmitoyl groups, and it is unclear how or whether this affects the distribution and/or function of this kinase. In the case of the TCR, it has been suggested that receptor ligation induces changes in the lipid environment around the receptor, which facilitates the access of downstream signalling molecules, including kinases. A third point of interest is that, in contrast to other Src kinases, Lck associates with the co-receptor CD4, which is an integral membrane protein. It is possible that the lipid micro-environment and dynamics of CD4-bound and -unbound Lck diffusion differ.

We propose to characterize the organization and interaction dynamics of a lipid-anchored protein at the T-cell surface, i.e. myristoylated and palmitoylated Lck, both in relation to different lipids, and in comparison to other components of the signalling machinery of the T-cell including CD4, using STED(-FCS) microscopy. We expect these novel experiments to highlight, in thus far unprecedented detail, the organization of key signalling proteins at the T-cell surface, and to create a critical framework for understanding receptor triggering.

Funding Notes

Funding for this project is available to basic scientists through the RDM Scholars Programme, which offers funding to outstanding candidates from any country. Successful candidates will have all tuition and college fees paid and will receive a stipend of £18,000 per annum.

For October 2017 entry, the application deadline is 6th January 2017 at 12 noon (midday).

Please visit our website for more information on how to apply.

References

[1] J.R. James, J. McColl, M.I. Oliveira, P.D. Dunne, E. Huang, A. Jansson, P. Nilsson, D.L. Sleep, C.M. Gonçalves, S.H. Morgan, J.H. Felce, R. Mahen, R.A. Fernandes, A.M. Carmo, D. Klenerman, S.J. Davis. The T cell receptor triggering apparatus is composed of monovalent or monomeric proteins. J Biol Chem 286, 31993-200 (2011).

[2] K. Simons, M.J. Gerl. Revitalizing membrane rafts: new tools and insights. Nature Rev Mol Cell Biol 11, 688-99 (2010).

[3] C. Eggeling, K.I. Willig, F.J. Barrantes. STED microscopy of living cells - New frontiers in membrane and neurobiology. J Neurochem 126, 203–212 (2013).

[4] C. Eggeling, K.I. Willig, S.J. Sahl, S.W. Hell. Lens-based fluorescence nanoscopy. Q Rev Biophys 48, 178–243 (2015).

[5] C. Eggeling, C. Ringemann, R. Medda, G. Schwarzmann, K. Sandhoff, S. Polyakova. V. N. Belov, B. Hein, C. von Middendorff, A. Schönle, S.W. Hell. Direct observation of the nanoscale dynamics of membrane lipids in a living cell. Nature 457, 1159-1163 (2009).

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