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  (MRC CASE DTP) The stratification of fungal airway disease patients to facilitate better treatment outcomes.


   Faculty of Biology, Medicine and Health

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  Dr M Bromley, Dr PC Cook, Prof P Bowyer  No more applications being accepted  Competition Funded PhD Project (European/UK Students Only)

About the Project

This project has the potential to make a significant impact to the lives of patients suffering with debilitating fungal disease. In collaboration with our industrial partners, F2G Ltd, we will identify key drivers of fungal allergy and identify potential routes to therapeutic intervention.

The fungus Aspergillus fumigatus is a major pathogen of the human airways. Exposure to this fungus is a frequent cause of asthma, and can to severe fungal asthma disease which impacts 10 million people worldwide. Most strikingly of the 0.5 million related asthma deaths each year, 50% are fungal asthmatics. There is an urgent need to better understand disease pathogenesis to inform the development of improved therapeutics and precision targeting of these therapeutics, as current agents are ineffective and resistance is developing.

Dendritic cells (DCs) are highly specialised cells that upon exposure to fungi, potently activate immune responses that can lead to asthma. Despite the prevalence, little is known about how exposure of DCs to Aspergillus elicits allergic responses. This project will address the key question of how Aspergillus prompt DCs to activate and direct immune inflammation, and how this leads to allergic disease. Aspergillus can germinate and grow rapidly in the airways and in doing so releases a myriad of components (e.g. proteins, metabolites, proteases, carbohydrates) that come into contact with DCs. However, it is now known which of these signals cause DCs to drive inflammation that underpins allergic disease or how they are regulated. Central to the project will be utilising a unique Aspergillus mutant stain library, to determine the key fungal derived components that are required for DCs to orchestrate and sustain allergic inflammation in the airways. We will assess if patients suffering from allergic diseases are defective in their response to any of the fungal allergens identified here (using well characterised bio-banked samples) and we will attempt to identify common SNPs in the genomes of these patients.

Our preliminary data suggests that inhaled spores need to germinate to induce an allergic reaction. Our industrial partners, F2G Ltd, have developed a novel antifungal therapy that is currently undergoing phase 2 clinical trials. This compound inhibits a novel fungal target that is required for spore germination. We will investigate whether their compound is able to interfere with the establishment of allergic responses in our models of infection and identify patient groups (using our bio-banked samples) where such therapeutics would be effective.

http://research.bmh.manchester.ac.uk/mfig
http://www.mccir.manchester.ac.uk


Funding Notes

This is a CASE studentship in partnership with F2G Ltd and will be funded under the MRC Doctoral Training Programme. If you are interested in this project, please make direct contact with the Supervisor to discuss the project further as soon as possible. You MUST also submit an online application form. On the application form under Programme Description, select 'MRC DTP PhD Programme'. Interviews will be held w/c 16 July.

Applications are invited from UK/EU nationals only. Applicants must have obtained, or be about to obtain, at least an upper second class honours degree (or equivalent) in a relevant subject.

References

Gsaller F, Hortschansky P, Furukawa T, Carr P, Rash B, Capilla J, Muller C, Bracher F, Bowyer P, Hass H, Brakhage A, Bromley M. (2016) Sterol Biosynthesis and Azole Tolerance Is Governed by the Opposing Actions of SrbA and the CCAAT Binding Complex. PLoS Pathog 12(7): e1005775. doi:10.1371/journal.ppat.1005775.

Denning DW, Bromley MJ (2015) How to bolster the antifungal pipeline. Science 347 (6229): 1414-1416

Smith N, Bromley MJ, Denning DW, Simpson A, Bowyer P (2014) Elevated levels of the neutrophil chemoattractant PPBP in macrophages from individuals with chronic and allergic aspergillosis. J Infect Dis. doi: 10.1093/infdis/jiu490

Johns A, Scharf DH, Gsaller F, Schmidt H, Heinekamp T, Straßburger M, Oliver JD, Birch M, Beckmann N, Dobb KS, Gilsenan J, Rash B, Bignell E, Brakhage AA, Bromley MJ. A Nonredundant Phosphopantetheinyl Transferase, PptA, Is a Novel Antifungal Target That Directs Secondary Metabolite, Siderophore, and Lysine Biosynthesis in Aspergillus fumigatus and Is Critical for Pathogenicity. 2017 MBio. 2017 Jul 18;8(4). pii: e01504-16

Cook PC and MacDonald AS. Dendritic cells in lung immunopathology. Semin Immunopathol. 2016, 38(4): 449-460.

Cook PC, Owen H, Deaton AM, Borger JG, Brown SL, Clouaire T, Jones G, Jones LH, Lundie RJ, Marley AK, Morrison VL, Phythian-Adams AT, Wachter E, Webb LM, Sutherland TE, Thomas GD, Grainger JR, Selfridge J, McKenzie AN, Allen JE, Fagerholm SC, Maizels RM, Ivens AC, Bird A, MacDonald AS. A dominant role for the methyl-CpG binding domain protein Mbd2 in controlling Th2 induction by dendritic cells. 2015. Nat Commun. 6: 6920.

Webb LM, Lundie RJ, Borger JG, Brown SL, Connor LM, Cartwright AN, Dougall AM, Wilbers RH, Cook PC, Jackson-Jones LH, Phythian-Adams AT, Johansson C, Davis DM, Dewals BG, Ronchese F, MacDonald AS. Type I interferon is required for T helper (Th) 2 induction by dendritic cells. EMBO J. 2017 Aug 15;36(16):2404-2418