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  Effect of nanotechnology on mixed microbial populations.


   School of Chemical Engineering

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Dr K Gkatzionis Dr T Overton  No more applications being accepted  Funded PhD Project (European/UK Students Only)

About the Project

A PhD position is available at the School of Chemical Engineering, University of Birmingham, recent recipient of a Queen’s Anniversary Prize for its outstanding track record in collaborative research and training.
Project description
This multidisciplinary project aims to investigate the responses of mixed microbial communities to nanotechnology applications, with a particular focus on food processing and food safety. It is well known that microorganisms rarely exist alone in nature and exist as part of complex microbial communities (including as multispecies biofilms), and are frequently present in foods in this state. The microbial interactions occurring in mixed microbial communities and their responses to external factors are complex and different than those concerning single species. These microbial functions and responses can favour the survival of particular species and strains, induce cross-protection and mutations, and promote microbial resistance. Hence, there is a strong societal need to develop new approaches to control of microbial levels in foods to ensure they are safe for consumption.
Nanotechnology is an emerging trend offering promising applications for controlling microorganisms. However, the impact of nanomaterials and nanotools on mixed microbial populations is not well understood and is the focus of this project. The research is poised on the intersection between molecular microbiology, food microbiology and food processing, and reflects the strengths of the University of Birmingham in these three areas. The exact programme of research will be defined by discussion between the student and supervisors, and will focus on two main areas:
Effect of nanotechnology on complex microbial communities:
• Effect on microbial community composition.
• Differences between direct delivery of nanomaterials and application of nanotools.
• Multispecies biofilms and microbial hosts.
Mechanism of action of nanomaterials:
• Size of the nanoparticles and mode of killing.
• Accumulation and location of the nanoparticles in the microbial cell.
• The role of nanomaterials in the development of microbial resistance to metals and/or antimicrobials.

The research will involve the use of molecular microbiology techniques (such as PCR, reporter gene assays, next generation sequencing), flow cytometry and imaging techniques (such as fluorescence and confocal microscopy). http://www.birmingham.ac.uk/facilities/genomics/index.aspx

Funding Notes

Applicants require a 2:1 or higher in molecular biology, microbiology, biochemistry or in a related subject area. Specific interest or previous work in molecular microbiology would be an advantage.
Informal enquiries should be directed to Dr Kostas Gkatzionis: [Email Address Removed]
Applications need to be made via the University of Birmingham Admissions Portal:
https://pga.bham.ac.uk/lpages/EPS020.htm Closing date: Friday, 31 May 2013

Open Days


Project supervisors

Dr K Gkatzionis's profile is coming soon

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Career overview

Dr Tim Overton is a Reader in Microbial Biotechnology at the University of Birmingham''s School of Chemical Engineering. He holds a BSc (Hons) in Biochemistry with Molecular and Cell Biology (1999) and a PhD in Biochemistry (2003), both from the University of Birmingham. Dr Overton''s academic journey began with training as a biochemist, followed by a postdoctoral research position where he investigated bacterial responses to oxygen and various stresses. His interest in bioprocessing of biopharmaceuticals was sparked during a collaborative project with GSK, focusing on the production of challenging recombinant proteins in *E. coli*. Dr Overton''s research is centred on applying molecular biology and single-cell techniques to enhance bioprocesses, particularly in microbial flow cytometry. He collaborates extensively with bioprocess engineers, molecular microbiologists, cell biologists, and environmental microbiologists to develop innovative methods for addressing fundamental questions at the single-cell level. His work encompasses using bacteria to produce valuable products, such as protein drugs and small molecules, and understanding bacterial stress responses in these processes. He is a member of the Healthcare Technologies Institute (HTI), an interdisciplinary network of over 70 academics dedicated to advancing new technologies and treatments for improved tissue healing and rehabilitation. Dr Overton''s research themes include the regulation of antibiotic resistance (AMR), the formation of bacterial biofilms, and optimising processes for the production of high-value microbial products. His contributions to the field are recognised through his involvement in various committees, including the BBSRC and UKRI Talent, and as a peer reviewer for numerous scientific journals and funding bodies. In addition to his research, Dr Overton is actively engaged in teaching at both undergraduate and postgraduate levels, covering topics such as basic biology, molecular biology, systems and synthetic biology, and fermentation processes. He also supervises practical laboratory work and is involved in various wellbeing initiatives within the university.


Research interests

Dr Tim Overton''s research focuses on microbial biotechnology, specifically applying molecular biology and single-cell techniques to enhance bioprocesses. He is actively involved in microbial flow cytometry research and collaborates with bioprocess engineers, molecular microbiologists, cell biologists, and environmental microbiologists to address fundamental questions at the single-cell level. His research encompasses three main themes: understanding biofilm formation and prevention, optimising bacterial processes for producing valuable products like insulin, and addressing antimicrobial resistance (AMR) through antibiotic efficacy. Dr Overton investigates the regulation of AMR, the relationship between energy metabolism and AMR, and the mechanisms by which antibiotics penetrate bacterial cells. In the area of biofilms, he explores how external stimuli drive biofilm formation and seeks methods to prevent it, including the use of vibration. His work on utilising bacteria for the production of high-value products includes optimising fermentation processes and developing novel promoters for recombinant protein production. Dr Overton''s research is supported by funding from organisations such as BBSRC, TSB, and EU FP7, and he is part of the Healthcare Technologies Institute, which aims to translate research into health applications.

View Dr Tim Overton's profile