Faculty of Biology, Medicine and Health

The University of Manchester

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  Genome-wide synchronization of circadian gene expression

Dr C Heintzen, Dr Susan Crosthwaite  Applications accepted all year round  Self-Funded PhD Students Only

About the Project

Circadian clocks are molecular oscillators that have evolved to ensure that genetic programs are switched on or off at times when their activation or inhibition is of highest adaptive value. Amongst the processes controlled by circadian clocks are cell signalling, cell cycle progression, and timing of development. Disrupting the temporal control of these processes has severe consequences for physiology and behaviour that range from abnormal control of development in plants and fungi to depression, sleep-wake disorders and cancer in humans. The eukaryote Neurospora crassa is one of the key model systems used in the molecular dissection of circadian clocks and its study has helped to identify elements and modes of regulation that are common to all eukaryotic clocks, including that of humans. In Neurospora processes, such as MAPK signalling, light and temperature signalling, cell cycle control, sexual and asexual development and many other important processes are all controlled by the circadian clock. Without synchronization of circadian clocks the temporal organization of the above mentioned processes breaks down and one of our interests focuses on the molecular events that synchronize circadian clocks with the rhythmic environment. The proposed PhD project will identify genes and their products that are involved in light and temperature signalling pathways that are important for clock synchronization. During the project the PhD student will be trained in a variety of cutting edge molecular and genetics techniques. If you would like to make a significant contribution to our understanding of biological clocks and temporal regulation of gene expression and are interested in a friendly and stimulating working environment that will provide you with a sound education in state of the art molecular biology techniques, we are looking forward to receiving your application

Funding Notes

www.ls.manchester.ac.uk/phdprogrammes/howtoapply

References

Hunt, SM, Thompson, S, Elvin, M, & Heintzen, C (2010). The photoreceptor VVD interacts with the WHITE-COLLAR complex and FRH to influence light and circadian clock responses in Neurospora. Proceedings of the National Academy of Sciences, in press.

Heintzen, C & Liu, Y (2007) The Neurospora crassa circadian clock. Advances in Genetics 58, 25-66.

Hunt, SM, Elvin, M, Crosthwaite, SK & Heintzen, C (2007) The PAS/LOV protein VIVID controls temperature compensation of circadian clock phase and development in Neurospora crassa. Genes and Development 21, 1964-74.

Elvin, M, Loros, JJ, Dunlap, JC & Heintzen, C (2005) The PAS/LOV protein VIVID supports a rapidly dampened daytime oscillator that facilitates entrainment of the Neurospora circadian clock. Genes and Development 19, 2593-605.

Heintzen, C, Loros, JJ & Dunlap, JC (2001) The PAS protein VIVID defines a clock-associated feedback loop that represses light input, modulates gating, and regulates clock resetting. Cell 104, 453-64

Where will I study?

Faculty of Biology, Medicine and Health

Tackle real world challenges, make a difference, and elevate your career with postgraduate research in the Faculty of Biology, Medicine and Health at Manchester. From biochemistry to neuroscience, cancer sciences to medicine, audiology to mental health and everything in between, we offer a wide range of postgraduate research projects, programmes and funding which will allow you to immerse yourself in an area of research you’re passionate about.

Why study at the Faculty of Biology, Medicine and Health?

Experience PhD life as part of a diverse postgraduate research community of more than 1,000 postgraduate researchers at the 29th most international university in the world (Times Higher Education, 2023).

Ranked the best place to live in the UK (The Economist Global Liveability Index, 2022), Manchester boasts world-class culture, iconic sports, a thriving music and food scene, and much more. It's not just a place to research, it's a place to call home.

With 93% of research activity at the University rated as 'world-leading' or 'internationally excellent' (Research Excellence Framework, 2021), you'll get the chance to have an impact on global health and science challenges.

1000+

postgraduate students

1

PhD

6th

in the UK - QS (2025)

Manchester  United Kingdom

main campus

About the Faculty of Biology, Medicine and Health

At Manchester, postgraduate researchers are at the heart of our mission to tackle pressing global challenges in biological, medical and healthcare sciences - and you could be too.

By choosing Manchester for your postgraduate research, you’ll be joining a university with an exceptional research reputation, where 93% of research is world-leading or internationally excellent (REF, 2021) and where your work will have real-world impact.

You’ll research in world-class facilities alongside leading experts at the forefront of innovation, collaborating across disciplines to pioneer new treatments, advance scientific knowledge, and improve healthcare globally.

Supported by our dedicated Doctoral Academy and strong industry links, you'll experience PhD life in a vibrant, welcoming and diverse postgraduate research community.

And you’ll leave with the specialist knowledge, research experience and transferable skills that will shape your future in academia, research or industry.





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